A Secret Service agent goes to Wayward Pines, Idaho, in search of two federal agents who have gone missing in the bucolic town. He soon learns that he may never get out of Wayward Pines alive.
Cast: Matt Dillon, Carla Gugino, Toby Jones, Shannyn Sossamon, Reed Diamond, Tim Griffin, Charlie Tahan, Juliette Lewis, Melissa Leo, Terrence Howard, Siobhan Fallon, Hope Davis, Sarah Jeffery
Pilcher recalls finding his Chosen One; Jason makes a fatal judgment call; Theo and Xander must put aside their differences to stop him before the human race is lost.
Theo enlists the help of Hassler to capture Margaret; Xander has a confrontation with Rebecca about her condition.
Theo and Megan take opposite views of the Abbies' intelligence as Theo tries to communicate with their leader. And later, an underestimation proves extremely costly. Elsewhere, a reflective CJ ponders the great responsibilities he has had over the centuries.
Teresa is put in grave danger and the town's food supply is critically low after the Abbies attack CJ and the harvesters. Meanwhile, Theo is able to build a makeshift triage unit, but repairing his marriage to Rebecca proves more difficult. And finally, Xander proves there's some fight left in him when Jason questions his abilities to lead.
The creation of Wayward Pines is recalled when Rebecca thinks back to meeting with Pilcher as an architect. Meanwhile, a secret shocks Theo; Teresa reveals to CJ and Adam her desire to live outside the protected walls; and Megan experiments on a captured female.
Xander returns to Wayward Pines with someone unexpected, who helps him better understand the Abbies' intentions; at the same time, Rebecca finds herself at odds with Megan over a young girl who's trying to escape a town tradition; and CJ disregards Theo's protests when as he leads a brave group on an expedition beyond the fence.
Nurse Pam resurfaces as a lethal threat to the town; Jason's past becomes known.
Theo tries to leverage his power as the only surgeon in Wayward Pines to get answers about the status of his wife, Rebecca; at the same time, town historian CJ Mitchum spearheads a vital and potentially deadly project outside the fence. Meanwhile, Theresa frantically searches for her son; and Megan Fisher heads up the research being done on the Abbies.
In the Season 2 premiere, Dr. Theo Yedlin awakens from suspended animation and finds himself in the middle of a rebellion in Wayward Pines.